PacBio transcriptome analysis & visualization, made easy.
IsoPops is an R package designed to filter and process PacBio long-read transcripts for more straightforward, sophisticated analysis of alternative splicing datasets. IsoPops organizes isoform information into compact, interpretable tables at the transcript, ORF, and gene levels. Informative plots ranging from simple bar charts to PCA-based diversity maps can be generated in only a few lines of code. IsoPops is currently available for download on Github.
Explore novel approaches to the visualization of complex gene-isoform diversity
Get summary statistics plots for each gene to quickly compare isoform composition across multiple datasets
Zoom in on alternative splicing events in a single gene
Visualize relationships between isoforms using unsupervised machine learning
